Structures,
Shapes & Polarities |
Jmol is Java based and does not require a plug in to view the molecules. |
Rasmol colors are used in the exercise. In the jmol menu bar click on Options and rasmolColors. To check atom: either put the screen cursor on the atom, or click on Console, then click open, and then click the atom.
A B C 1 1A 1B 1C 2 2A 2B 2C 3 3A 3B 3C 4 4A 4B 4C [Organic Molecules Worksheet (1)]
Click on the active link in each of the squares above for a molecule's image (lone pairs of electrons are not in the images). The images must be manipulated in order to get an accurate view of the molecules; not all of the atoms will be visible without doing so. Complete the table provided to you; for each image: 1) Write the molecular formula for the molecule. 2) Identify the number of valence electrons for each atom in the molecule and the total number of electrons for the complete molecule. 3) Draw a Lewis structure that represents the molecule, 4) Describe the shape of the molecule, and to the best of your ability indicate if you think that molecule is polar or non-polar. For example, 4A: SO2, S=6, O=6, SO2=18, bent shape, polar: see handout for the Lewis structure.
Resonance:
Using the jmol bond length feature, check the respective bond lengths for 4A: SO2, by double clicking on the sulfur atom and then each respective oxygen atom. The Web model has equal bond lengths (1.565 Angstroms, 0.1565 nm) for both sulfur to oxygen bonds, despite a Lewis structure which shows an S-O single bond that is >1.57 Angstroms (Å), and an S=O double bond that is < 1.57 Angstroms (Å). The two possible Lewis structures for SO2. are shown below. In one case there is a single bond on the right, double on the left, and in the other case a double bond on the right and a single bond on the left.
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The actual, net result is a weighted average of the two. In this case, the Sulfur-Oxygen bond is a double bond about 50% of the time and a single bond about 50% of the time.
Draw 3 different Lewis structures for the polyatomic carbonate ion CO32- using arrows to show the electron movements between the three structures. (The 2- charge indicates that there are 2 additional electrons in the ion.) Check the bond lengths with jmol and record the bond length values in Angstroms (Å) for the respective bonds. Repeat the steps for the acetate ion.
Consider that a pure C-O single bond is about 1.40 Å, and a pure C=O double bond is about 1.20 Å. Briefly describe the bond character of the Carbon-Oxygen bonds in the respective polyatomic ions.
Water Diethyl ether Methanol Acetone Formaldehyde Carbon dioxide Acetic acid Carbonate ion Acetate ion Carbon monoxide Draw Lewis structures for methanol, diethyl ether, formaldehyde, acetone, and acetic acid.
© Copyright 2008 R.J. Rusay